PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00026938-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bHLH
Protein Properties Length: 294aa    MW: 31386.4 Da    PI: 6.2567
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00026938-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-08143187554
                         HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         h+++Er RR+ri ++   L+el+P+ +      K + a++L + v+Y+k L
  WALNUT_00026938-RA 143 HSIAERLRRERIAERVRALQELVPSvN------KTDRAAMLDEIVDYVKFL 187
                         99***********************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.26E-14136197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.97E-11136192No hitNo description
PROSITE profilePS5088815.815138187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-14140197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-6143187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-9144193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0031347Biological Processregulation of defense response
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MANNHPSSEA TTNDDFLDQI LGIQTFGSAD TGGLHAPDGG LSAGGAPPPM MLQLNSGDVS  60
GGFHGQVFPL GLSLDQGKGG FLKPEEASGS GKRFRDDLVD GRASSMKNVF HGQPMPTTVA  120
AAPHPPTMRP RVRARRGQAT DPHSIAERLR RERIAERVRA LQELVPSVNK TDRAAMLDEI  180
VDYVKFLRLQ VKVLSMSRLG GAGAVAPLVT DIPLSSVEEE GSDGGRNQPA WEKWSNDGTE  240
RQVAKLMEEN VGAAMQFLQS KALCIMPISL ASAIYQTQPS DTSSIVKPES NPPP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147152RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891470.11e-163PREDICTED: transcription factor UNE12
SwissprotO227681e-135UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A067JPB11e-158A0A067JPB1_JATCU; Uncharacterized protein
STRINGGLYMA19G34360.11e-157(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54493253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-124bHLH family protein